Biochemistry · Molecular Biology (DNA Replication, Repair, Transcription, Translation)

Xeroderma pigmentosum (XP) results from defective nucleotide excision repair (NER). Which of the following correctly describes the step in NER that is specifically defective in XPC-deficient patients?

  • A XPC is part of the incision machinery that cuts the damaged strand 5' and 3' to the lesion; its deficiency prevents excision of the 24–32 nucleotide oligomer
  • B XPC deficiency impairs transcription-coupled NER only; global genome NER remains intact as the damage is recognised by RPA instead
  • C XPC deficiency impairs the global genome NER (GG-NER) subpathway by failing to recognise helix-distorting bulky lesions (e.g., CPDs, 6-4 PPs) throughout the genome, while transcription-coupled NER (TC-NER) remains intact
  • D XPC deficiency causes failure to verify the correctness of the repair patch by mismatch repair, leading to mutation fixation
Correct answer: C. XPC deficiency impairs the global genome NER (GG-NER) subpathway by failing to recognise helix-distorting bulky lesions (e.g., CPDs, 6-4 PPs) throughout the genome, while transcription-coupled NER (TC-NER) remains intact

Explanation

NER has two subpathways: global genome NER (GG-NER) and transcription-coupled NER (TC-NER). XPC (in complex with HR23B) is the primary damage recognition factor in GG-NER, detecting helix-distorting lesions such as cyclobutane pyrimidine dimers (CPDs) and 6-4 photoproducts throughout non-transcribed genomic DNA. TC-NER is initiated differently by stalled RNA polymerase II (recognised by CSA/CSB proteins) and does not require XPC. Therefore, XPC-deficient patients have defective GG-NER but intact TC-NER. This is why XP complementation groups (XPA-XPG) have differing clinical severity based on which subpathway is affected.

Reference: Harper's Illustrated Biochemistry, 32nd ed.

High-yield for: NEET PGINI-CETNExTFMGEUSMLEPLABMRCP

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