Biochemistry · Enzymes (Kinetics, Mechanism, Clinical Significance)

Covalent catalysis is the mechanism used by serine protease enzymes. In the catalytic mechanism of chymotrypsin, which three amino acid residues form the catalytic triad and what are their functions?

  • A Ser-195 (nucleophile), His-57 (general base/acid), Asp-102 (orients and stabilises His via hydrogen bond) — the charge relay system
  • B Ser-195 (electrophile), Lys-57 (proton donor), Asp-102 (general acid) — the charge relay system
  • C Thr-195 (nucleophile), His-57 (acid-base), Glu-102 (electrostatic stabilisation)
  • D Ser-195 (nucleophile), His-57 (general base), Cys-102 (forms a disulfide with Ser to stabilise the catalytic cleft)
Correct answer: A. Ser-195 (nucleophile), His-57 (general base/acid), Asp-102 (orients and stabilises His via hydrogen bond) — the charge relay system

Explanation

Serine proteases (chymotrypsin, trypsin, elastase, thrombin, factor Xa) share the canonical catalytic triad: Ser-195 acts as the nucleophile attacking the carbonyl carbon of the peptide bond; His-57 acts as a general base (accepting the proton from Ser-195) and then as a general acid (donating the proton to the leaving amine); Asp-102 is hydrogen-bonded to His-57, stabilising the positive charge on His (imidazolium) during the tetrahedral intermediate. This constitutes the charge relay system. The catalytic mechanism proceeds via a covalent acyl-enzyme intermediate.

Reference: Harper's Illustrated Biochemistry, 32nd ed.

High-yield for: NEET PGINI-CETNExTFMGEUSMLEPLABMRCP

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